STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGX57021.1Pyruvate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (339 aa)    
Predicted Functional Partners:
OGX56247.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.980
OGX56248.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.975
OGX56516.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.975
OGX56796.1
Transaldolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.974
OGX56235.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.971
OGX56236.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.970
OGX56338.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.970
OGX56240.1
50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.969
OGX56239.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.968
OGX56241.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.968
Your Current Organism:
Omnitrophica WOR2 bacterium RIFOXYC2FULL3812
NCBI taxonomy Id: 1801877
Other names: O. WOR_2 bacterium RIFOXYC2_FULL_38_12, Omnitrophica WOR_2 bacterium RIFOXYC2_FULL_38_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.