STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHB33068.1C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)    
Predicted Functional Partners:
OHB33069.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
OHB33070.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
OHB33067.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.977
OHB33066.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.889
OHB33065.1
C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
OHB33071.1
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.719
OHB25145.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.492
OHB25221.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.475
A2X84_05525
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.427
OHB33175.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.416
Your Current Organism:
Desulfuromonadaceae bacterium GWC25813
NCBI taxonomy Id: 1801896
Other names: D. bacterium GWC2_58_13, Desulfuromonadaceae bacterium GWC2_58_13, Pelobacteraceae bacterium GWC2_58_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.