STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHB32819.1Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
OHB28608.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.987
OHB26037.1
Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.970
OHB32359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.946
OHB29451.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.876
OHB29008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
0.854
A2X84_00155
Twin-arginine translocation pathway signal protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.833
OHB26623.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.713
OHB26649.1
Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.676
OHB25529.1
FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.671
OHB32818.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.658
Your Current Organism:
Desulfuromonadaceae bacterium GWC25813
NCBI taxonomy Id: 1801896
Other names: D. bacterium GWC2_58_13, Desulfuromonadaceae bacterium GWC2_58_13, Pelobacteraceae bacterium GWC2_58_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.