STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHB32292.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (133 aa)    
Predicted Functional Partners:
OHB25933.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.829
A2X84_14085
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
   
 
  0.829
OHB33496.1
Bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.791
OHB32291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
OHB32290.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.677
gcvH
Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
    
  0.627
OHB32293.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.580
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.
    
  0.561
OHB32288.1
DNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
OHB32289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
Your Current Organism:
Desulfuromonadaceae bacterium GWC25813
NCBI taxonomy Id: 1801896
Other names: D. bacterium GWC2_58_13, Desulfuromonadaceae bacterium GWC2_58_13, Pelobacteraceae bacterium GWC2_58_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.