STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGJ59898.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)    
Predicted Functional Partners:
OGJ59897.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.752
OGJ59838.1
Nucleoside-diphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.731
A2881_03850
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pyruvate kinase family.
   
 0.727
folE
GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.703
OGJ59794.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the Nudix hydrolase family.
   
  0.691
OGJ59932.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.679
OGJ57982.1
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
 
  0.488
OGJ58380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the small heat shock protein (HSP20) family.
   
   0.430
OGJ60099.1
CDP-paratose 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.418
OGJ59858.1
NAD-dependent epimerase; Phage-associated protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.418
Your Current Organism:
Peribacteria bacterium RIFCSPHIGHO201FULL5513
NCBI taxonomy Id: 1801917
Other names: C. Peribacteria bacterium RIFCSPHIGHO2_01_FULL_55_13, Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_55_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.