STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ19867.1Protein of unknown function. (586 aa)    
Predicted Functional Partners:
SEQ20261.1
Hypothetical protein.
    
  0.825
SEQ20102.1
Hypothetical protein.
  
  
 0.807
SEQ19904.1
Hypothetical protein.
     
 0.799
SEQ19987.1
Phage-related lysozyme (muramidase), GH24 family.
       0.790
SEQ84590.1
Tape measure domain-containing protein.
  
    0.783
SEQ19952.1
Protein of unknown function.
       0.782
SEQ20032.1
Hypothetical protein.
       0.773
SEQ19779.1
Hypothetical protein.
       0.768
SEQ19819.1
Hypothetical protein.
       0.768
SEQ19683.1
Hypothetical protein.
       0.741
Your Current Organism:
Giesbergeria anulus
NCBI taxonomy Id: 180197
Other names: ATCC 35958, Aquaspirillum anulus, CCUG 49446, G. anulus, IAM 14948, JCM 21430, NBRC 14917, NCIMB 9012, Spirillum anulus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.