Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ23990.1 | SEQ24046.1 | SAMN02982919_00277 | SAMN02982919_00278 | Hsp70 protein. | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | 0.805 |
SEQ23990.1 | SEQ37364.1 | SAMN02982919_00277 | SAMN02982919_00557 | Hsp70 protein. | FeS assembly scaffold apoprotein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.915 |
SEQ23990.1 | SEQ37409.1 | SAMN02982919_00277 | SAMN02982919_00558 | Hsp70 protein. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.640 |
SEQ23990.1 | SEQ37649.1 | SAMN02982919_00277 | SAMN02982919_00562 | Hsp70 protein. | Ferredoxin, 2Fe-2S. | 0.661 |
SEQ23990.1 | hscB | SAMN02982919_00277 | SAMN02982919_00560 | Hsp70 protein. | Molecular chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.926 |
SEQ23990.1 | iscS | SAMN02982919_00277 | SAMN02982919_00556 | Hsp70 protein. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.518 |
SEQ24046.1 | SEQ23990.1 | SAMN02982919_00278 | SAMN02982919_00277 | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | Hsp70 protein. | 0.805 |
SEQ24046.1 | SEQ37364.1 | SAMN02982919_00278 | SAMN02982919_00557 | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | FeS assembly scaffold apoprotein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.915 |
SEQ24046.1 | SEQ37409.1 | SAMN02982919_00278 | SAMN02982919_00558 | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.640 |
SEQ24046.1 | SEQ37649.1 | SAMN02982919_00278 | SAMN02982919_00562 | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | Ferredoxin, 2Fe-2S. | 0.661 |
SEQ24046.1 | hscB | SAMN02982919_00278 | SAMN02982919_00560 | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | Molecular chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.925 |
SEQ24046.1 | iscS | SAMN02982919_00278 | SAMN02982919_00556 | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.518 |
SEQ37279.1 | SEQ37364.1 | SAMN02982919_00555 | SAMN02982919_00557 | Transcriptional regulator, BadM/Rrf2 family. | FeS assembly scaffold apoprotein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.976 |
SEQ37279.1 | SEQ37409.1 | SAMN02982919_00555 | SAMN02982919_00558 | Transcriptional regulator, BadM/Rrf2 family. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.903 |
SEQ37279.1 | SEQ37649.1 | SAMN02982919_00555 | SAMN02982919_00562 | Transcriptional regulator, BadM/Rrf2 family. | Ferredoxin, 2Fe-2S. | 0.676 |
SEQ37279.1 | hscB | SAMN02982919_00555 | SAMN02982919_00560 | Transcriptional regulator, BadM/Rrf2 family. | Molecular chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.905 |
SEQ37279.1 | iscS | SAMN02982919_00555 | SAMN02982919_00556 | Transcriptional regulator, BadM/Rrf2 family. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.991 |
SEQ37364.1 | SEQ23990.1 | SAMN02982919_00557 | SAMN02982919_00277 | FeS assembly scaffold apoprotein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | Hsp70 protein. | 0.915 |
SEQ37364.1 | SEQ24046.1 | SAMN02982919_00557 | SAMN02982919_00278 | FeS assembly scaffold apoprotein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | 0.915 |
SEQ37364.1 | SEQ37279.1 | SAMN02982919_00557 | SAMN02982919_00555 | FeS assembly scaffold apoprotein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | Transcriptional regulator, BadM/Rrf2 family. | 0.976 |
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