STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ96544.1General secretion pathway protein G. (148 aa)    
Predicted Functional Partners:
SEQ96687.1
General secretion pathway protein J.
 
 0.989
SEQ96717.1
General secretion pathway protein K.
 
 
 0.985
SEQ96905.1
Type II secretion system protein E (GspE).
 
 0.971
SEQ96871.1
General secretion pathway protein D.
  
 0.958
SEQ96622.1
General secretion pathway protein I.
 
  
 0.942
SER87304.1
Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.
   
0.859
SEQ79957.1
General secretion pathway protein G.
  
  
 
0.846
SEQ80020.1
Type II secretion system protein E (GspE).
 
 0.842
SEQ96834.1
General secretion pathway protein N.
 
   
 0.840
SEQ96748.1
General secretion pathway protein L.
 
  
 0.838
Your Current Organism:
Giesbergeria anulus
NCBI taxonomy Id: 180197
Other names: ATCC 35958, Aquaspirillum anulus, CCUG 49446, G. anulus, IAM 14948, JCM 21430, NBRC 14917, NCIMB 9012, Spirillum anulus
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