Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ22850.1 | SER51742.1 | SAMN02982919_00251 | SAMN02982919_02528 | Hypothetical protein. | Putative regulatory protein, FmdB family. | 0.468 |
SEQ42224.1 | SER51742.1 | SAMN02982919_00654 | SAMN02982919_02528 | Acetyltransferase. | Putative regulatory protein, FmdB family. | 0.410 |
SER51668.1 | SER51742.1 | SAMN02982919_02527 | SAMN02982919_02528 | ATP-dependent DNA helicase RecQ. | Putative regulatory protein, FmdB family. | 0.539 |
SER51742.1 | SEQ22850.1 | SAMN02982919_02528 | SAMN02982919_00251 | Putative regulatory protein, FmdB family. | Hypothetical protein. | 0.468 |
SER51742.1 | SEQ42224.1 | SAMN02982919_02528 | SAMN02982919_00654 | Putative regulatory protein, FmdB family. | Acetyltransferase. | 0.410 |
SER51742.1 | SER51668.1 | SAMN02982919_02528 | SAMN02982919_02527 | Putative regulatory protein, FmdB family. | ATP-dependent DNA helicase RecQ. | 0.539 |
SER51742.1 | SER51773.1 | SAMN02982919_02528 | SAMN02982919_02529 | Putative regulatory protein, FmdB family. | Methyl-accepting chemotaxis protein. | 0.432 |
SER51773.1 | SER51742.1 | SAMN02982919_02529 | SAMN02982919_02528 | Methyl-accepting chemotaxis protein. | Putative regulatory protein, FmdB family. | 0.432 |