STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGZ33101.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (586 aa)    
Predicted Functional Partners:
OGZ33100.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.993
OGZ32952.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.969
OGZ33095.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.914
OGZ32951.1
Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.869
OGZ31844.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.839
OGZ31845.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.839
OGZ32876.1
Four helix bundle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.828
OGZ32577.1
Four helix bundle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.828
OGZ33139.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.828
OGZ31846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.828
Your Current Organism:
Portnoybacteria bacterium RBG13408
NCBI taxonomy Id: 1801990
Other names: C. Portnoybacteria bacterium RBG_13_40_8, Candidatus Portnoybacteria bacterium RBG_13_40_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.