STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC27313.1YeeE/YedE; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
OHC27314.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.983
OHC27315.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.863
OHC27312.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.814
OHC27465.1
Response regulator SirA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.
  
  
 0.631
cysN
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
    0.579
gltB
Glutamate synthase large subunit; Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.456
OHC27311.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.413
OHC26668.1
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.412
Your Current Organism:
Pseudomonadales bacterium RIFCSPLOWO212599
NCBI taxonomy Id: 1802009
Other names: P. bacterium RIFCSPLOWO2_12_59_9, Pseudomonadales bacterium RIFCSPLOWO2_12_59_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.