STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC27672.1Prepilin-type N-terminal cleavage/methylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)    
Predicted Functional Partners:
OHC27673.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.969
OHC27671.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.955
OHC27674.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.955
OHC27687.1
Type IV pilus modification protein PilV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.859
OHC29962.1
MSHA biogenesis protein MshJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.800
OHC29966.1
MSHA biogenesis protein MshI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.797
OHC29964.1
Pilus (MSHA type) biogenesis protein MshL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
OHC27676.1
MSHA biogenesis protein MshG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.767
OHC27678.1
Type II secretory pathway pseudopilin PulG; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.721
OHC27691.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.682
Your Current Organism:
Pseudomonadales bacterium RIFCSPLOWO212599
NCBI taxonomy Id: 1802009
Other names: P. bacterium RIFCSPLOWO2_12_59_9, Pseudomonadales bacterium RIFCSPLOWO2_12_59_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.