STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC27116.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)    
Predicted Functional Partners:
OHC27117.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.964
OHC26111.1
PrkA family serine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.832
OHC27160.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.623
OHC26109.1
SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.585
A2Y50_02675
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.562
OHC28179.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.540
OHC32325.1
Dodecin flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.525
OHC26110.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.
   
    0.520
bamE
Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
  
 0.483
OHC29091.1
Poly(3-hydroxyalkanoate) granule-associated protein PhaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.457
Your Current Organism:
Pseudomonadales bacterium RIFCSPLOWO212599
NCBI taxonomy Id: 1802009
Other names: P. bacterium RIFCSPLOWO2_12_59_9, Pseudomonadales bacterium RIFCSPLOWO2_12_59_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.