STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC27176.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)    
Predicted Functional Partners:
OHC27177.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.892
OHC27175.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OHC27174.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.568
OHC27173.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
 0.507
murC
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
    
 0.487
OHC27956.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.453
mrdA
Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
  
  
 0.435
A2Y50_12760
Thymidine phosphorylase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.435
OHC28988.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.426
Your Current Organism:
Pseudomonadales bacterium RIFCSPLOWO212599
NCBI taxonomy Id: 1802009
Other names: P. bacterium RIFCSPLOWO2_12_59_9, Pseudomonadales bacterium RIFCSPLOWO2_12_59_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.