STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGK19879.1DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (368 aa)    
Predicted Functional Partners:
OGK21820.1
DNA polymerase III, subunit gamma and tau; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.999
OGK20694.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.997
OGK19880.1
Chromosomal replication initiator protein DnaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
OGK20019.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.994
OGK20131.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.992
OGK21293.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.992
OGK20069.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.992
OGK21277.1
DNA polymerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.991
A3C23_02515
ATP synthase F0 subunit A; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.987
OGK21034.1
Replicative DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.984
Your Current Organism:
Roizmanbacteria bacterium RIFCSPHIGHO202FULL3713b
NCBI taxonomy Id: 1802035
Other names: C. Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_37_13b, Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_37_13b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.