STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGK27561.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (322 aa)    
Predicted Functional Partners:
OGK27232.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
OGK25700.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.979
OGK27562.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.942
OGK26321.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.883
OGK26020.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.880
A3C28_05330
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.865
OGK25559.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.839
OGK25688.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.814
OGK28614.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.801
OGK28615.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.801
Your Current Organism:
Roizmanbacteria bacterium RIFCSPHIGHO202FULL399
NCBI taxonomy Id: 1802040
Other names: C. Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_39_9, Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_02_FULL_39_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.