STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGK41037.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)    
Predicted Functional Partners:
OGK41038.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGK43123.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.612
OGK42016.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.570
OGK41039.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.567
OGK41040.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.567
OGK41425.1
Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.549
OGK42528.1
50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.547
OGK42531.1
DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.547
OGK42535.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.547
OGK41441.1
Translation initiation factor IF-2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.547
Your Current Organism:
Roizmanbacteria bacterium RIFCSPLOWO201FULL3713
NCBI taxonomy Id: 1802057
Other names: C. Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_13, Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.