STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGL09266.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (786 aa)    
Predicted Functional Partners:
OGL09271.1
LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
OGL09281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.905
OGL08984.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.900
OGL07509.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.897
OGL09252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.893
OGL11406.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.892
OGL08634.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.865
OGL11868.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.844
OGL09503.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.844
OGL10900.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.830
Your Current Organism:
Rokubacteria bacterium RIFCSPLOWO202FULL7356
NCBI taxonomy Id: 1802107
Other names: C. Rokubacteria bacterium RIFCSPLOWO2_02_FULL_73_56, Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_73_56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.