STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGL09710.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (290 aa)    
Predicted Functional Partners:
OGL09711.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
A3I14_05325
Peptide ABC transporter permease; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.977
OGL12086.1
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
OGL07474.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.975
OGL07483.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.959
OGL09712.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.956
OGL08587.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.954
OGL11711.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.952
OGL11246.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.952
A3I14_06070
Death-on-curing protein; Metagenomic; derived from metagenome: subsurface metagenome.
 
 0.952
Your Current Organism:
Rokubacteria bacterium RIFCSPLOWO202FULL7356
NCBI taxonomy Id: 1802107
Other names: C. Rokubacteria bacterium RIFCSPLOWO2_02_FULL_73_56, Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_73_56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.