STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGZ55499.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (398 aa)    
Predicted Functional Partners:
OGZ55981.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.998
OGZ55997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.994
OGZ55967.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.986
OGZ55965.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.979
OGZ55969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.961
OGZ55588.1
UDP-N-acetylenolpyruvoylglucosamine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.956
OGZ56049.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.943
OGZ55883.1
Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.912
glyA
Serine hydroxymethyltransferase; Catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.891
OGZ55676.1
Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.754
Your Current Organism:
Ryanbacteria bacterium RIFCSPLOWO212FULL4426
NCBI taxonomy Id: 1802130
Other names: C. Ryanbacteria bacterium RIFCSPLOWO2_12_FULL_44_26, Candidatus Ryanbacteria bacterium RIFCSPLOWO2_12_FULL_44_26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.