STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGZ58157.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (308 aa)    
Predicted Functional Partners:
OGZ58158.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.954
OGZ57552.1
Ornithine--oxo-acid transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.872
OGZ57323.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.764
OGZ57408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.696
OGZ58469.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.683
gltX
glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
    
  0.668
OGZ57745.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.658
OGZ58446.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.652
A2827_02985
methylmalonyl-CoA mutase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.632
OGZ58589.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.631
Your Current Organism:
Spechtbacteria bacterium RIFCSPHIGHO201FULL4330
NCBI taxonomy Id: 1802158
Other names: C. Spechtbacteria bacterium RIFCSPHIGHO2_01_FULL_43_30, Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_01_FULL_43_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.