STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGZ62533.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (377 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
     
 0.999
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
    
 0.999
A3H51_00855
Hypothetical protein; Too many ambiguous residues; incomplete; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.999
OGZ62296.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
A3H51_02660
Deoxyuridine 5'-triphosphate nucleotidohydrolase; Metagenomic; derived from metagenome: subsurface metagenome.
    
  0.999
OGZ61915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.999
OGZ61453.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.999
OGZ62531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.820
OGZ62532.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.818
OGZ61917.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.766
Your Current Organism:
Spechtbacteria bacterium RIFCSPLOWO202FULL388
NCBI taxonomy Id: 1802164
Other names: C. Spechtbacteria bacterium RIFCSPLOWO2_02_FULL_38_8, Candidatus Spechtbacteria bacterium RIFCSPLOWO2_02_FULL_38_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.