STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC86303.1Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (630 aa)    
Predicted Functional Partners:
OHC85539.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.873
OHC86304.1
Dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.727
OHC85699.1
Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.651
OHC85411.1
Carboxylate-amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.646
OHC86102.1
Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.632
OHC86996.1
Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.632
OHC85680.1
Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.631
OHC84916.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.618
OHC86909.1
Phosphoribosylformylglycinamidine synthase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.616
OHC84234.1
1-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.615
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.