STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC86629.1Quinol:cytochrome C oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)    
Predicted Functional Partners:
OHC86628.1
Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.999
OHC84056.1
Cytochrome C oxidase Cbb3; CcoN/CcoO FixN/FixO; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OHC86631.1
Quinol:cytochrome C oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.998
OHC86630.1
Quinol:cytochrome C oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
   0.995
OHC86627.1
[Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.986
OHC86626.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.980
OHC86633.1
Cytochrome c oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.956
OHC86632.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.934
OHC85030.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.917
OHC85182.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.916
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.