STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC86666.1Transcriptional regulator AsnC; Transcriptional repressor of asnA which codes for aspartate-ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
OHC86665.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.768
OHC84963.1
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
OHC86741.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.743
OHC86401.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.628
OHC86400.1
Pseudouridine-5-phosphate glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.552
OHC85539.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.507
A2472_03290
2-isopropylmalate synthase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.473
OHC86604.1
3-isopropylmalate dehydratase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.471
OHC85349.1
Phosphoribosylanthranilate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.439
OHC85835.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.431
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.