STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC86757.1UDP-glucose 4-epimerase GalE; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
OHC84422.1
Galactokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
OHC84477.1
Galactose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.937
OHC85691.1
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.842
OHC84533.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.828
OHC84082.1
hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.809
OHC86074.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.732
OHC86360.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.655
OHC86758.1
Inorganic phosphate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.652
OHC85690.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.646
OHC84927.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.645
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.