STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC86773.1SUI1 family translation initiation factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)    
Predicted Functional Partners:
OHC85401.1
Translation initiation factor IF-1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.997
OHC84883.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.989
OHC84880.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.986
OHC84890.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.985
OHC85312.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.984
OHC84876.1
30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.983
OHC84885.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.983
OHC84893.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.983
OHC85400.1
30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.982
OHC84892.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.982
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.