STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC85286.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)    
Predicted Functional Partners:
OHC86694.1
methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.837
OHC85285.1
Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
OHC85283.1
Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.714
OHC85522.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.660
OHC84617.1
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.650
OHC85287.1
Class II fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.639
OHC86705.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.636
OHC84618.1
Lipoprotein ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.636
OHC86744.1
Endonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.626
OHC85425.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.608
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.