STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC85618.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)    
Predicted Functional Partners:
OHC84575.1
Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.997
OHC85575.1
Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.967
OHC85605.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.967
OHC85617.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
OHC86720.1
alanine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.852
OHC86843.1
ATP-dependent protease ATP-binding subunit ClpX; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.830
OHC85099.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.777
OHC84216.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.703
OHC86749.1
Phosphopyruvate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.683
OHC85800.1
Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.668
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.