STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC85742.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (232 aa)    
Predicted Functional Partners:
OHC84627.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.775
OHC87004.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.760
OHC85185.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.755
OHC85198.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.755
OHC84707.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.755
OHC84267.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.755
OHC85743.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
OHC85744.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
OHC85844.1
Nitrite reductase, copper-containing; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.435
OHC85745.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.434
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.