STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC85866.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)    
Predicted Functional Partners:
OHC85539.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.876
OHC86126.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.861
OHC84073.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.847
OHC85649.1
Zn-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.845
A2472_10405
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.840
OHC85545.1
Heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.824
OHC85828.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.824
OHC86362.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.806
OHC86443.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.806
OHC84704.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.794
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.