STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC85121.1Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)    
Predicted Functional Partners:
OHC86029.1
Preprotein translocase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.837
OHC84951.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.790
OHC85729.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.721
OHC85238.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.720
OHC86723.1
Band 7 protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.577
OHC87032.1
Band 7 protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.577
OHC85767.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.577
OHC84950.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.572
OHC86166.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.536
OHC86430.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.