STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC84984.1XynC protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)    
Predicted Functional Partners:
OHC84983.1
XynC protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.791
OHC84985.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.774
OHC84986.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.539
OHC85078.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.528
OHC84987.1
HupE / UreJ protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.518
OHC85888.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.488
OHC85265.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.467
OHC86633.1
Cytochrome c oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.412
fadH
NADPH-dependent 2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.401
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.