STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC85101.1Glycoside hydrolase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (1049 aa)    
Predicted Functional Partners:
OHC84324.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.904
OHC84477.1
Galactose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.822
OHC84696.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.822
OHC84138.1
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.773
OHC84663.1
Glucosylceramidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.765
OHC86355.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.761
OHC85316.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.738
OHC85609.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.712
OHC84422.1
Galactokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.694
OHC86978.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.691
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.