STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC84538.1Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)    
Predicted Functional Partners:
OHC84537.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OHC86867.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
OHC85406.1
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.836
OHC84539.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
OHC84536.1
Sugar acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
OHC86553.1
Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.739
OHC84533.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.734
OHC86741.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.730
OHC84701.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
OHC84540.1
Acyl-protein synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.