STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC84707.1Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)    
Predicted Functional Partners:
OHC86669.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.896
OHC86831.1
ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.792
OHC85913.1
Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.792
OHC84058.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.792
OHC84628.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.788
OHC84629.1
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.778
OHC85742.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.755
OHC84630.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.564
OHC84879.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.536
OHC84627.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.