STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHC84180.1Aminotransferase class III; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)    
Predicted Functional Partners:
OHC86678.1
N-acetyl-gamma-glutamyl-phosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.931
OHC86681.1
Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.922
OHC86824.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
   0.901
OHC86683.1
Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.853
OHC86680.1
Acetylornithine carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.834
OHC85546.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.819
OHC86679.1
Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.818
OHC86677.1
Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.810
OHC86612.1
Bifunctional aspartate kinase/homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.785
OHC86682.1
Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.756
Your Current Organism:
Sphingobacteriia bacterium RIFOXYC2FULL3518
NCBI taxonomy Id: 1802166
Other names: S. bacterium RIFOXYC2_FULL_35_18, Sphingobacteriia bacterium RIFOXYC2_FULL_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.