STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHD11960.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)    
Predicted Functional Partners:
OHD11959.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
OHD11962.1
Aerotolerance regulator BatA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.958
OHD11963.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
OHD11965.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.939
OHD11964.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.937
OHD11961.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.787
OHD09964.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.574
A2Y41_07330
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
  
  
 0.574
OHD11966.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.564
OHD09719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.530
Your Current Organism:
Spirochaetes bacterium GWB13613
NCBI taxonomy Id: 1802174
Other names: S. bacterium GWB1_36_13, Spirochaetes bacterium GWB1_36_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.