STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHD10352.1tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (415 aa)    
Predicted Functional Partners:
OHD10351.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.810
OHD10354.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.785
OHD10353.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.784
OHD11622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the radical SAM superfamily. RlmN family.
 
  
 0.779
OHD10350.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OHD10355.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OHD14047.1
23S rRNA (adenine(2503)-C(2))-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.
 
  
 0.765
A2Y41_10250
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.741
OHD10349.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.718
OHD10348.1
Peptidase M50; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.703
Your Current Organism:
Spirochaetes bacterium GWB13613
NCBI taxonomy Id: 1802174
Other names: S. bacterium GWB1_36_13, Spirochaetes bacterium GWB1_36_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.