STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGZ80623.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (348 aa)    
Predicted Functional Partners:
OGZ80625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.989
OGZ80234.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.914
OGZ80035.1
Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.913
OGZ80512.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.890
OGZ80618.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.835
OGZ80639.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.822
OGZ80675.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.820
OGZ80624.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.816
OGZ80150.1
Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.814
A2353_00045
Ribonucleoside triphosphate reductase; Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.813
Your Current Organism:
Staskawiczbacteria bacterium RIFOXYB1FULL3837
NCBI taxonomy Id: 1802224
Other names: C. Staskawiczbacteria bacterium RIFOXYB1_FULL_38_37, Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_38_37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.