STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGZ79876.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (245 aa)    
Predicted Functional Partners:
OGZ80026.1
Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.994
OGZ80051.1
Methionine adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.842
OGZ80231.1
Serine hydroxymethyltransferase; Catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.811
OGZ80140.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.799
OGZ80138.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.797
OGZ80137.1
F0F1 ATP synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.790
OGZ80132.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.778
OGZ80133.1
F0F1 ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.778
OGZ80134.1
ATP synthase F1 subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.719
OGZ80512.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.706
Your Current Organism:
Staskawiczbacteria bacterium RIFOXYB1FULL3837
NCBI taxonomy Id: 1802224
Other names: C. Staskawiczbacteria bacterium RIFOXYB1_FULL_38_37, Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_38_37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.