STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGZ80438.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (171 aa)    
Predicted Functional Partners:
OGZ80584.1
rRNA maturation RNase YbeY; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.970
OGZ80693.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.958
OGZ80660.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.933
OGZ80077.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.865
OGZ79875.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.859
OGZ80622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.857
OGZ80048.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.852
OGZ80517.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.847
OGZ80076.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.826
OGZ80695.1
50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.817
Your Current Organism:
Staskawiczbacteria bacterium RIFOXYB1FULL3837
NCBI taxonomy Id: 1802224
Other names: C. Staskawiczbacteria bacterium RIFOXYB1_FULL_38_37, Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_38_37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.