STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGZ80392.1isoleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (966 aa)    
Predicted Functional Partners:
OGZ80390.1
arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
OGZ79899.1
glutamate--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
OGZ80409.1
methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.995
OGZ80174.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.994
OGZ80240.1
leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.981
OGZ79995.1
lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.977
OGZ80399.1
glycine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.798
OGZ80391.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.777
OGZ80394.1
DNA repair protein RecO; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.775
OGZ80389.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
Your Current Organism:
Staskawiczbacteria bacterium RIFOXYB1FULL3837
NCBI taxonomy Id: 1802224
Other names: C. Staskawiczbacteria bacterium RIFOXYB1_FULL_38_37, Candidatus Staskawiczbacteria bacterium RIFOXYB1_FULL_38_37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.