STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHE09457.1Redox-regulated ATPase YchF; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)    
Predicted Functional Partners:
OHE08797.1
aminoacyl-tRNA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.889
OHE08866.1
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.816
OHE10511.1
Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.812
OHE10568.1
Elongation factor 4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.797
OHE09390.1
methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.793
OHE09929.1
Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.784
OHE09683.1
arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.760
OHE10963.1
CTP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.723
A2513_00010
Flagellin; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.720
OHE10425.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.710
Your Current Organism:
Sulfurimonas sp. RIFOXYD12FULL3339
NCBI taxonomy Id: 1802259
Other names: S. sp. RIFOXYD12_FULL_33_39, Sulfurimonas sp. RIFOXYD12_FULL_33_39
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.