STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHE10406.1Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)    
Predicted Functional Partners:
OHE09212.1
Di-trans,poly-cis-decaprenylcistransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.949
OHE08878.1
Octaprenyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
0.911
OHE08864.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.905
OHE10403.1
Aspartate 1-decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.804
OHE10404.1
Nucleoid-associated protein, YbaB/EbfC family; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.804
OHE10405.1
Pdz/Dhr/GlgF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.802
OHE10407.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.783
OHE10402.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
OHE10952.1
Ribonuclease J; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.639
OHE08788.1
1-deoxy-D-xylulose-5-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.638
Your Current Organism:
Sulfurimonas sp. RIFOXYD12FULL3339
NCBI taxonomy Id: 1802259
Other names: S. sp. RIFOXYD12_FULL_33_39, Sulfurimonas sp. RIFOXYD12_FULL_33_39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.