STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHE10440.1Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)    
Predicted Functional Partners:
OHE09073.1
Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
OHE09700.1
4-hydroxybenzoate polyprenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.981
OHE10269.1
F0F1 ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.940
OHE10002.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.928
OHE10865.1
Hydroxyacid dehydrogenase; Involved in the metabolism of aromatic amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.927
OHE10984.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.908
OHE10519.1
ATP synthase F0 subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.906
OHE09819.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.892
OHE09881.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.887
OHE09836.1
Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.885
Your Current Organism:
Sulfurimonas sp. RIFOXYD12FULL3339
NCBI taxonomy Id: 1802259
Other names: S. sp. RIFOXYD12_FULL_33_39, Sulfurimonas sp. RIFOXYD12_FULL_33_39
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