STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHE09914.1Ribonuclease HI; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
OHE10358.1
Ribonuclease HII; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.890
OHE09913.1
Ribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.887
OHE09262.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.863
OHE10544.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.863
OHE09912.1
Chorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.825
A2513_00010
Flagellin; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.824
OHE09915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.823
OHE09916.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
OHE10434.1
Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.738
OHE11008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.651
Your Current Organism:
Sulfurimonas sp. RIFOXYD12FULL3339
NCBI taxonomy Id: 1802259
Other names: S. sp. RIFOXYD12_FULL_33_39, Sulfurimonas sp. RIFOXYD12_FULL_33_39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.