STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3C07_04590Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (204 aa)    
Predicted Functional Partners:
OGZ98395.1
DNA polymerase III; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.999
OGZ98592.1
DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.999
hisC
Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.854
A3C07_04560
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
  
 
 0.845
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
 
 0.844
OGZ99345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.786
A3C07_02345
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.774
OHA00806.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.757
OHA00065.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.751
OGZ99509.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.570
Your Current Organism:
Sungbacteria bacterium RIFCSPHIGHO202FULL4711
NCBI taxonomy Id: 1802270
Other names: C. Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_47_11, Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_47_11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.