STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3A28_0585050S ribosomal protein L10; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (126 aa)    
Predicted Functional Partners:
A3A28_00385
tRNA-Leu; Metagenomic; derived from metagenome: subsurface metagenome.
   
 
 0.999
OHA04558.1
30S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
OHA05692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
OHA05717.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OHA05286.1
50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OHA04931.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OHA04932.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OHA04933.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OHA04934.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OHA04935.1
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
Your Current Organism:
Sungbacteria bacterium RIFCSPLOWO201FULL4732
NCBI taxonomy Id: 1802277
Other names: C. Sungbacteria bacterium RIFCSPLOWO2_01_FULL_47_32, Candidatus Sungbacteria bacterium RIFCSPLOWO2_01_FULL_47_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.