STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHE24302.1Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)    
Predicted Functional Partners:
ybeY
rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.968
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.852
OHE24307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.
       0.627
OHE24303.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.626
OHE24304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.609
OHE22208.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.445
cmk
Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.431
Your Current Organism:
Syntrophus sp. GWC25631
NCBI taxonomy Id: 1802291
Other names: S. sp. GWC2_56_31, Syntrophus sp. GWC2_56_31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.